patternschemav0.3.8
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pattern schema

Version 0.3.8

43kinds
20reference kinds
522attributes
50enumerations
334enum values
kindreference kindparent / childreference⋲many
schema adverse-event->meddra-disease adverse-event->study-day adverse-event->subject adverse-event->timepoint assay->measurement-set atac-peak->genomic-coordinate cell-population->cell-population cell-population->cell-type cell-population->epitope cell-type->cell-type chr-acc-reg->genomic-coordinate clinical-intervention->gdc-anatomic-site clinical-intervention->sample clinical-intervention->subject clinical-intervention->timepoint clinical-intervention->treatment-regimen clinical-intervention-set->clinical-intervention clinical-observation->gdc-anatomic-site clinical-observation->lab-test clinical-observation->study-day clinical-observation->subject clinical-observation->timepoint clinical-observation-set->adverse-event clinical-observation-set->clinical-observation clinical-trial-therapy->treatment-regimen cnv->gene cnv->genomic-coordinate dataset->assay dataset->clinical-intervention-set dataset->clinical-observation-set dataset->sample dataset->study-day dataset->subject dataset->timepoint dataset->treatment-regimen drug-regimen->drug epitope->protein gene->genomic-coordinate gene-product->gene measurement->atac-peak measurement->cell-population measurement->cnv measurement->epitope measurement->gene-product measurement->metabolite-feature measurement->nanostring-signature measurement->otu measurement->pathway measurement->sample measurement->sgb measurement->single-cell measurement->tcr measurement->variant measurement-matrix->cell-population measurement-matrix->epitope measurement-matrix->gene-product measurement-matrix->sample measurement-matrix->single-cell measurement-set->atac-peak measurement-set->cell-population measurement-set->measurement measurement-set->measurement-matrix measurement-set->otu measurement-set->sgb measurement-set->single-cell measurement-set->tcr nanostring-signature->gene protein->gene sample->gdc-anatomic-site sample->study-day sample->subject sample->timepoint single-cell->cell-population single-cell->sample subject->clinical-trial-therapy subject->comorbidity subject->meddra-disease treatment-regimen->clinical-trial treatment-regimen->drug-regimen variant->gene variant->genomic-coordinate variant->neo-antigen variant->so-sequence-feature adverse-event adverse-event assay assay atac-peak atac-peak cell-population cell-population cell-type cell-type chr-acc-reg chr-acc-reg clinical-intervention clinical-intervention clinical-intervention-set clinical-intervention-set clinical-observation clinical-observation clinical-observation-set clinical-observation-set clinical-trial clinical-trial clinical-trial-therapy clinical-trial-therapy cnv cnv comorbidity comorbidity dataset dataset drug drug drug-regimen drug-regimen epitope epitope gdc-anatomic-site gdc-anatomic-site gene gene gene-product gene-product genomic-coordinate genomic-coordinate lab-test lab-test measurement measurement measurement-matrix measurement-matrix measurement-set measurement-set meddra-disease meddra-disease metabolite-feature metabolite-feature nanostring-signature nanostring-signature neo-antigen neo-antigen otu otu pathway pathway protein protein sample sample sgb sgb single-cell single-cell so-sequence-feature so-sequence-feature study-day study-day subject subject tcr tcr timepoint timepoint treatment-regimen treatment-regimen variant variant

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Kinds

Core kinds 23

Reference kinds 20

Shared reference data (genes, drugs, anatomy, …) that other kinds point to.

Enumerations 50